X3D Example Archives: Basic, Chemical Markup Language

[1] _1_4_Dihydronaphthalene.x3d Inspect _1_4_Dihydronaphthalene
Directory Viewpoint Slideshow

Chemical Markup Language (CML)

Chemical Markup Language (CML) provides support for most chemistry including molecules, compounds, reactions, spectra, crystals and computational chemistry.

These examples show how to visualize Chemical Markup Language (CML) molecular definitions, combined with previously designed X3D model prototypes, by converting CML molecule definitions in XML through CmlToX3d.xslt stylesheet transformations. This process is described in the paper "Stylesheet Transformations for Interactive Visualization: Towards a Web3D Chemistry Curricula," originally published in Proceedings of Web3D 2003 Symposium, St. Malo France, 9-12 March 2003, ACM Press.

23 X3D Models                 67 X3D Model Viewpoint Snapshots

_1_4_Dihydronaphthalene
1 4 Dihydronaphthalene.x3d    
[1] _1_4_Dihydronaphthalene.x3d Inspect _1_4_Dihydronaphthalene
Viewpoint image from X3D model [2] _1_4_Dihydronaphthalene.x3d title billboard
Viewpoint image from X3D model [3] _1_4_Dihydronaphthalene.x3d (default X3D view from 0 0 10)

_3_Methyl_1H_indene
3 Methyl 1 H indene.x3d    
[4] _3_Methyl_1H_indene.x3d Inspect _3_methyl_1h_indene
Viewpoint image from X3D model [5] _3_Methyl_1H_indene.x3d title billboard
Viewpoint image from X3D model [6] _3_Methyl_1H_indene.x3d (default X3D view from 0 0 10)

AceticAcid
Acetic Acid.x3d    
Viewpoint image from X3D model [7] AceticAcid.x3d Inspect AceticAcid
Viewpoint image from X3D model [8] AceticAcid.x3d title billboard
Viewpoint image from X3D model [9] AceticAcid.x3d (default X3D view from 0 0 10)

Alanine
Alanine.x3d    
Viewpoint image from X3D model [10] Alanine.x3d Inspect Alanine
Viewpoint image from X3D model [11] Alanine.x3d title billboard
Viewpoint image from X3D model [12] Alanine.x3d (default X3D view from 0 0 10)

ButanedioicAcid
Butanedioic Acid.x3d    
Viewpoint image from X3D model [13] ButanedioicAcid.x3d Inspect ButanedioicAcid
Viewpoint image from X3D model [14] ButanedioicAcid.x3d title billboard
Viewpoint image from X3D model [15] ButanedioicAcid.x3d (default X3D view from 0 0 10)

Caffeine
Caffeine.x3d    
Viewpoint image from X3D model [16] Caffeine.x3d Inspect Caffeine
Viewpoint image from X3D model [17] Caffeine.x3d title billboard
Viewpoint image from X3D model [18] Caffeine.x3d (default X3D view from 0 0 10)

Cholesterol
Cholesterol.x3d    
Viewpoint image from X3D model [19] Cholesterol.x3d Inspect Cholesterol
Viewpoint image from X3D model [20] Cholesterol.x3d title billboard
Viewpoint image from X3D model [21] Cholesterol.x3d (default X3D view from 0 0 10)

Cortisone
Cortisone.x3d    
Viewpoint image from X3D model [22] Cortisone.x3d Inspect Cortisone
Viewpoint image from X3D model [23] Cortisone.x3d title billboard
Viewpoint image from X3D model [24] Cortisone.x3d (default X3D view from 0 0 10)

CyclohexeneOxide
Cyclohexene Oxide.x3d    
Viewpoint image from X3D model [25] CyclohexeneOxide.x3d Inspect CyclohexeneOxide
Viewpoint image from X3D model [26] CyclohexeneOxide.x3d title billboard
Viewpoint image from X3D model [27] CyclohexeneOxide.x3d (default X3D view from 0 0 10)

Cyclopentanamine
Cyclopentanamine.x3d    
Viewpoint image from X3D model [28] Cyclopentanamine.x3d Inspect Cyclopentanamine
Viewpoint image from X3D model [29] Cyclopentanamine.x3d title billboard
Viewpoint image from X3D model [30] Cyclopentanamine.x3d (default X3D view from 0 0 10)

Digitoxigenin
Digitoxigenin.x3d    
Viewpoint image from X3D model [31] Digitoxigenin.x3d Inspect Digitoxigenin
Viewpoint image from X3D model [32] Digitoxigenin.x3d title billboard
Viewpoint image from X3D model [33] Digitoxigenin.x3d (default X3D view from 0 0 10)

DimethylSulfoxide
Dimethyl Sulfoxide.x3d    
Viewpoint image from X3D model [34] DimethylSulfoxide.x3d Inspect DimethylSulfoxide
Viewpoint image from X3D model [35] DimethylSulfoxide.x3d title billboard
Viewpoint image from X3D model [36] DimethylSulfoxide.x3d (default X3D view from 0 0 10)

Ethanol
Ethanol.x3d    
Viewpoint image from X3D model [37] Ethanol.x3d Inspect Ethanol
Viewpoint image from X3D model [38] Ethanol.x3d title billboard
Viewpoint image from X3D model [39] Ethanol.x3d (default X3D view from 0 0 10)

GlycerolDiacetate
Glycerol Diacetate.x3d    
Viewpoint image from X3D model [40] GlycerolDiacetate.x3d Inspect GlycerolDiacetate
Viewpoint image from X3D model [41] GlycerolDiacetate.x3d title billboard
Viewpoint image from X3D model [42] GlycerolDiacetate.x3d (default X3D view from 0 0 10)

Histamine
Histamine.x3d    
Viewpoint image from X3D model [43] Histamine.x3d Inspect Histamine
Viewpoint image from X3D model [44] Histamine.x3d title billboard
Viewpoint image from X3D model [45] Histamine.x3d (default X3D view from 0 0 10)

Oxytocin
Oxytocin.x3d    
Viewpoint image from X3D model [46] Oxytocin.x3d Inspect Oxytocin
Viewpoint image from X3D model [47] Oxytocin.x3d title billboard
Viewpoint image from X3D model [48] Oxytocin.x3d (default X3D view from 0 0 10)

PyruvicAcid
Pyruvic Acid.x3d    
Viewpoint image from X3D model [49] PyruvicAcid.x3d Inspect PyruvicAcid
Viewpoint image from X3D model [50] PyruvicAcid.x3d title billboard
Viewpoint image from X3D model [51] PyruvicAcid.x3d (default X3D view from 0 0 10)

Riboflavin
Riboflavin.x3d    
Viewpoint image from X3D model [52] Riboflavin.x3d Inspect Riboflavin
Viewpoint image from X3D model [53] Riboflavin.x3d title billboard
Viewpoint image from X3D model [54] Riboflavin.x3d (default X3D view from 0 0 10)

SomatoStatin
Somato Statin.x3d    
Viewpoint image from X3D model [55] SomatoStatin.x3d Inspect SomatoStatin
Viewpoint image from X3D model [56] SomatoStatin.x3d title billboard
Viewpoint image from X3D model [57] SomatoStatin.x3d (default X3D view from 0 0 10)

TartaricAcid
Tartaric Acid.x3d    
Viewpoint image from X3D model [58] TartaricAcid.x3d Inspect TartaricAcid
Viewpoint image from X3D model [59] TartaricAcid.x3d title billboard
Viewpoint image from X3D model [60] TartaricAcid.x3d (default X3D view from 0 0 10)

Tetrahydrofuran
Tetrahydrofuran.x3d    
Viewpoint image from X3D model [61] Tetrahydrofuran.x3d Inspect tetrahydrofuran
Viewpoint image from X3D model [62] Tetrahydrofuran.x3d title billboard
Viewpoint image from X3D model [63] Tetrahydrofuran.x3d (default X3D view from 0 0 10)

TransDCE
Trans DCE.x3d    
Viewpoint image from X3D model [64] TransDCE.x3d Inspect TransDCE
Viewpoint image from X3D model [65] TransDCE.x3d title billboard
Viewpoint image from X3D model [66] TransDCE.x3d (default X3D view from 0 0 10)

VitaminK
Vitamin K.x3d    
Viewpoint image from X3D model [67] VitaminK.x3d Inspect VitaminK
Viewpoint image from X3D model [68] VitaminK.x3d title billboard
Viewpoint image from X3D model [69] VitaminK.x3d (default X3D view from 0 0 10)
 

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