<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE X3D PUBLIC "ISO//Web3D//DTD X3D 3.0//EN" "http://www.web3d.org/specifications/x3d-3.0.dtd">
<X3D profile='Immersive' version='3.0' xmlns:xsd='http://www.w3.org/2001/XMLSchema-instance' xsd:noNamespaceSchemaLocation=' http://www.web3d.org/specifications/x3d-3.0.xsd '>
<head>
<meta name='title' content='Oxytocin.x3d'/>
<meta name='description' content='Autogenerated version of Oxytocin.x3d scene produced from Oxytocin.xml Chemical Markup Language (CML) source file.'/>
<meta name='creator' content='Nicholas F. Polys'/>
<meta name='created' content='24 November 2005'/>
<meta name='modified' content='11 February 2012'/>
<meta name='reference' content='Oxytocin.xml'/>
<meta name='CML version' content='1.0'/>
<meta name='reference' content=' CML sources http://www.xml-cml.org '/>
<meta name='reference' content='JUMBO Chemical Format Conversion Tool'/>
<meta name='reference' content=' http://webbook.nist.gov/chemistry '/>
<meta name='reference' content='Polys.StylesheetTransformationsInteractiveVisualization.Web3d2003Symposium.pdf'/>
<meta name='reference' content='Originally Published in Proceedings of Web3D 2003, ACM Press'/>
<meta name='generator' content='CmlToX3d.xslt'/>
<meta name='identifier' content=' http://www.web3d.org/x3d/content/examples/Basic/ChemicalMarkupLanguage/Oxytocin.x3d '/>
<meta name='license' content=' ../license.html'/>
</head>
<!--
Index for ProtoDeclare definitions: Carbon, Hydrogen, Nitrogen, Oxygen, Fluorine, Silicon, Phosphorus, Sulphur, Chlorine, Bromine, Iodine, unknown, line, title_text, ano1_text, ano2_text
Index for DEF nodes: a1, a10, a11, a12, a13, a14, a15, a16, a17, a18, a19, a2, a20, a21, a22, a23, a24, a25, a26, a27, a28, a29, a3, a30, a31, a32, a33, a34, a35, a36, a37, a38, a39, a4, a40, a41, a42, a43, a44, a45, a46, a47, a48, a49, a5, a50, a51, a52, a53, a54, a55, a56, a57, a58, a59, a6, a60, a61, a62, a63, a64, a65, a66, a67, a68, a69, a7, a8, a9, ato_, ato__mat, atoBr, atoBr_mat, atoC, atoC_mat, atoCl, atoCl_mat, atoF, atoF_mat, atoH, atoH_mat, atoI, atoI_mat, atoN, atoN_mat, atoO, atoO_mat, atoP, atoP_mat, atoS, atoS_mat, atoSi, atoSi_mat, b1, b10, b10_2, b11, b12, b13, b14, b15, b16, b17, b18, b19, b19_2, b2, b20, b21, b22, b22_2, b23, b24, b25, b26, b27, b28, b29, b3, b30, b31, b32, b33, b34, b35, b35_2, b36, b37, b37_2, b38, b39, b4, b40, b41, b41_2, b42, b43, b44, b45, b45_2, b46, b47, b48, b49, b5, b50, b50_2, b51, b52, b53, b54, b55, b56, b57, b57_2, b58, b59, b59_2, b6, b60, b61, b62, b63, b63_2, b64, b65, b65_2, b66, b67, b68, b69, b7, b7_2, b70, b71, b71_2, b8, b9, bondo, cmpd_name, cmpd_name1, cmpd_name2, infogroupa
Index for Viewpoint image: Viewpoint_1
-->
<Scene>
<ProtoDeclare name='Carbon'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoC'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoC_mat' diffuseColor='0 0 0' shininess='.8' specularColor='.29 .3 .29'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='.77'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"C"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Hydrogen'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
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<ProtoBody>
<Group>
<Transform DEF='atoH'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoH_mat' ambientIntensity='.0933' diffuseColor='.38 .38 .42' shininess='0.5' specularColor='.53 .53 .53'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='.32'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"H"' solid='false'>
<FontStyle size='.4'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Nitrogen'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoN'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoN_mat' diffuseColor='0 0 .72' emissiveColor='0 0 .13' specularColor='.5 .5 .5'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='.75'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"N"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Oxygen'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoO'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoO_mat' ambientIntensity='.487' diffuseColor='.54 .05 .25' shininess='.2' specularColor='.81 .77 .75'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='.73'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"O"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Fluorine'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoF'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoF_mat' diffuseColor='1 .48 .79' emissiveColor='.09 .04 .07'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='.72'/>
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<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
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<Text string='"F"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
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<ProtoDeclare name='Silicon'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoSi'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoSi_mat' diffuseColor='.8 .8 .8'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='1.18'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"Si"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Phosphorus'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoP'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoP_mat' ambientIntensity='.11' diffuseColor='.9 .41 0' emissiveColor='.1 .04 0' shininess='0.8' specularColor='.1 .1 .1'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='1.1'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"P"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Sulphur'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoS'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoS_mat' ambientIntensity='.0467' diffuseColor='.25 .39 .25' emissiveColor='.05 .08 .05' shininess='0.6' specularColor='.11 .12 .08'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='1.3'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"S"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Chlorine'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoCl'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoCl_mat' diffuseColor='.28 .7 0' emissiveColor='.06 .15 0' shininess='0.8' specularColor='.5 .5 .5'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"Cl"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Bromine'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoBr'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoBr_mat' ambientIntensity='.0833' diffuseColor='.5 .3 .19' emissiveColor='.12 .13 .08' shininess='0.17' specularColor='.08 .08 .05'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='1.14'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"Br"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='Iodine'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='atoI'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='atoI_mat' diffuseColor='.56 .37 .74' emissiveColor='.15 .1 .2' shininess='.09' specularColor='.12 .12 .12'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere radius='1.33'/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"I"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='unknown'>
<ProtoInterface>
<field name='position' type='SFVec3f' value='0 0 0' accessType='inputOutput'/>
<field name='Mat' type='SFFloat' value='.6' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Group>
<Transform DEF='ato_'>
<IS>
<connect nodeField='translation' protoField='position'/>
</IS>
<Shape>
<Appearance>
<Material DEF='ato__mat' diffuseColor='1 1 1' emissiveColor='.15 .1 .2' shininess='.09' specularColor='.12 .12 .12'>
<IS>
<connect nodeField='transparency' protoField='Mat'/>
</IS>
</Material>
</Appearance>
<Sphere/>
</Shape>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text string='"?"' solid='false'>
<FontStyle size='.8'/>
</Text>
</Shape>
</Transform>
</Group>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='line'>
<ProtoInterface>
<field name='bond_set' type='MFVec3f' value='-1 0 0 1 0 0' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Transform>
<Shape>
<Appearance>
<Material diffuseColor='1 1 1' emissiveColor='1 1 1'/>
</Appearance>
<IndexedLineSet coordIndex='0 1 -1'>
<Coordinate DEF='bondo'>
<IS>
<connect nodeField='point' protoField='bond_set'/>
</IS>
</Coordinate>
</IndexedLineSet>
</Shape>
</Transform>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='title_text'>
<ProtoInterface>
<field name='txt' type='MFString' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Transform>
<Group>
<Transform>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
</Appearance>
<Text DEF='cmpd_name' solid='false'>
<IS>
<connect nodeField='string' protoField='txt'/>
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<FontStyle/>
</Text>
</Shape>
</Transform>
</Group>
</Transform>
</ProtoBody>
</ProtoDeclare>
<ProtoDeclare name='ano1_text'>
<ProtoInterface>
<field name='txt' type='MFString' accessType='inputOutput'/>
</ProtoInterface>
<ProtoBody>
<Transform>
<Group>
<Transform>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
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<Text DEF='cmpd_name1' solid='false'>
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</ProtoDeclare>
<ProtoDeclare name='ano2_text'>
<ProtoInterface>
<field name='txt' type='MFString' accessType='inputOutput'/>
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<ProtoBody>
<Transform>
<Group>
<Transform>
<Shape>
<Appearance>
<Material diffuseColor='0.9 0.9 0.9'/>
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<Text DEF='cmpd_name2' solid='false'>
<IS>
<connect nodeField='string' protoField='txt'/>
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<FontStyle size='.6'/>
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</Transform>
</Group>
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</ProtoBody>
</ProtoDeclare>
<Background groundAngle='1.309 1.571' groundColor='0 0.5 0.7 0 0.4 0.7 0.6 0.5 0.7' skyAngle='1.309 1.571' skyColor='0 0.5 0.8 0 0.6 .7 0.6 0.6 0.7'/>
<PointLight ambientIntensity='1' location='0 0 5' radius='30'/>
<NavigationInfo type='"EXAMINE" "FLY" "ANY"' transitionType='"ANIMATE"'/>
<Viewpoint description='Inspect Oxytocin' position='0 2 20'/>
<!-- Copyright by the U.S. Sec. Commerce on behalf of U.S.A. All rights reserved. -->
<!-- type="3D" <date day="23" month="11" year="1995"/> -->
<Transform DEF='infogroupa' translation='-8 2 -4'>
<Transform translation='0 6 0'>
<ProtoInstance name='title_text'>
<fieldValue name='txt' value='Oxytocin:'/>
</ProtoInstance>
</Transform>
</Transform>
<Group>
<Transform>
<ProtoInstance name='Nitrogen' DEF='a1'>
<fieldValue name='position' value='-2.0514 1.8507 0'/>
</ProtoInstance>
</Transform>
<Transform>
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</Transform>
<Transform>
<ProtoInstance name='Carbon' DEF='a3'>
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</Transform>
<Transform>
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<Transform>
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<fieldValue name='position' value='-4.649 0.8473 0'/>
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<Transform>
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<Transform>
<ProtoInstance name='Carbon' DEF='a7'>
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<Transform>
<ProtoInstance name='Oxygen' DEF='a8'>
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<Transform>
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<Transform>
<ProtoInstance name='Oxygen' DEF='a11'>
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<ProtoInstance name='Carbon' DEF='a15'>
<fieldValue name='position' value='1.2041 3.3892 0'/>
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<Transform>
<ProtoInstance name='Sulphur' DEF='a16'>
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<Transform>
<ProtoInstance name='Carbon' DEF='a18'>
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<Transform>
<ProtoInstance name='Oxygen' DEF='a20'>
<fieldValue name='position' value='-0.0446 4.3368 0'/>
</ProtoInstance>
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<Transform>
<ProtoInstance name='Sulphur' DEF='a21'>
<fieldValue name='position' value='2.2855 -3.5118 0'/>
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<Transform>
<ProtoInstance name='Nitrogen' DEF='a22'>
<fieldValue name='position' value='-9.7662 -0.7804 0'/>
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<Transform>
<ProtoInstance name='Oxygen' DEF='a23'>
<fieldValue name='position' value='-9.2088 1.8507 0'/>
</ProtoInstance>
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<Transform>
<ProtoInstance name='Carbon' DEF='a24'>
<fieldValue name='position' value='-7.7483 -2.5753 0'/>
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<Transform>
<ProtoInstance name='Nitrogen' DEF='a25'>
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<Transform>
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<fieldValue name='position' value='1.3936 5.7416 0'/>
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<Transform>
<ProtoInstance name='Carbon' DEF='a27'>
<fieldValue name='position' value='3.6568 -4.2253 0'/>
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<Transform>
<ProtoInstance name='Carbon' DEF='a28'>
<fieldValue name='position' value='-11.2825 -0.4459 0'/>
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<!--
Index for ProtoDeclare definitions: Carbon, Hydrogen, Nitrogen, Oxygen, Fluorine, Silicon, Phosphorus, Sulphur, Chlorine, Bromine, Iodine, unknown, line, title_text, ano1_text, ano2_text
Index for DEF nodes: a1, a10, a11, a12, a13, a14, a15, a16, a17, a18, a19, a2, a20, a21, a22, a23, a24, a25, a26, a27, a28, a29, a3, a30, a31, a32, a33, a34, a35, a36, a37, a38, a39, a4, a40, a41, a42, a43, a44, a45, a46, a47, a48, a49, a5, a50, a51, a52, a53, a54, a55, a56, a57, a58, a59, a6, a60, a61, a62, a63, a64, a65, a66, a67, a68, a69, a7, a8, a9, ato_, ato__mat, atoBr, atoBr_mat, atoC, atoC_mat, atoCl, atoCl_mat, atoF, atoF_mat, atoH, atoH_mat, atoI, atoI_mat, atoN, atoN_mat, atoO, atoO_mat, atoP, atoP_mat, atoS, atoS_mat, atoSi, atoSi_mat, b1, b10, b10_2, b11, b12, b13, b14, b15, b16, b17, b18, b19, b19_2, b2, b20, b21, b22, b22_2, b23, b24, b25, b26, b27, b28, b29, b3, b30, b31, b32, b33, b34, b35, b35_2, b36, b37, b37_2, b38, b39, b4, b40, b41, b41_2, b42, b43, b44, b45, b45_2, b46, b47, b48, b49, b5, b50, b50_2, b51, b52, b53, b54, b55, b56, b57, b57_2, b58, b59, b59_2, b6, b60, b61, b62, b63, b63_2, b64, b65, b65_2, b66, b67, b68, b69, b7, b7_2, b70, b71, b71_2, b8, b9, bondo, cmpd_name, cmpd_name1, cmpd_name2, infogroupa
Index for Viewpoint image: Viewpoint_1
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