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X3D Example Archives: Basic, Chemical Markup Language

[1] _1-4-Dihydronaphthalene.x3d - Inspect _1-4-Dihydronaphthalene


Chemical Markup Language (CML)

These examples show how to visualize Chemical Markup Language (CML) molecular definitions using previously designed X3D model prototypes by using an XSLT stylesheet transformations. This process is described in the paper "Stylesheet Transformations for Interactive Visualization: Towards a Web3D Chemistry Curricula," originally published in Proceedings of Web3D 2003 Symposium, St. Malo France, 9-12 March 2003, ACM Press.

23 X3D Scenes      69 Viewpoint Snapshots
1 - 4 - Dihydronaphthalene       [1] _1-4-Dihydronaphthalene.x3d - Inspect _1-4-Dihydronaphthalene

  [2] _1-4-Dihydronaphthalene.x3d - title billboard

  [3] _1-4-Dihydronaphthalene.x3d - (default X3D view from 0 0 10)

3 - Methyl - 1 H - indene       [4] _3-Methyl-1H-indene.x3d - Inspect _3-methyl-1h-indene

  [5] _3-Methyl-1H-indene.x3d - title billboard

  [6] _3-Methyl-1H-indene.x3d - (default X3D view from 0 0 10)

Acetic Acid       [7] AceticAcid.x3d - Inspect AceticAcid

  [8] AceticAcid.x3d - title billboard

  [9] AceticAcid.x3d - (default X3D view from 0 0 10)

Alanine       [10] Alanine.x3d - Inspect Alanine

  [11] Alanine.x3d - title billboard

  [12] Alanine.x3d - (default X3D view from 0 0 10)

Butanedioic Acid       [13] ButanedioicAcid.x3d - Inspect ButanedioicAcid

  [14] ButanedioicAcid.x3d - title billboard

  [15] ButanedioicAcid.x3d - (default X3D view from 0 0 10)

Caffeine       [16] Caffeine.x3d - Inspect Caffeine

  [17] Caffeine.x3d - title billboard

  [18] Caffeine.x3d - (default X3D view from 0 0 10)

Cholesterol       [19] Cholesterol.x3d - Inspect Cholesterol

  [20] Cholesterol.x3d - title billboard

  [21] Cholesterol.x3d - (default X3D view from 0 0 10)

Cortisone       [22] Cortisone.x3d - Inspect Cortisone

  [23] Cortisone.x3d - title billboard

  [24] Cortisone.x3d - (default X3D view from 0 0 10)

Cyclohexene Oxide       [25] CyclohexeneOxide.x3d - Inspect CyclohexeneOxide

  [26] CyclohexeneOxide.x3d - title billboard

  [27] CyclohexeneOxide.x3d - (default X3D view from 0 0 10)

Cyclopentanamine       [28] Cyclopentanamine.x3d - Inspect Cyclopentanamine

  [29] Cyclopentanamine.x3d - title billboard

  [30] Cyclopentanamine.x3d - (default X3D view from 0 0 10)

Digitoxigenin       [31] Digitoxigenin.x3d - Inspect Digitoxigenin

  [32] Digitoxigenin.x3d - title billboard

  [33] Digitoxigenin.x3d - (default X3D view from 0 0 10)

Dimethyl Sulfoxide       [34] DimethylSulfoxide.x3d - Inspect DimethylSulfoxide

  [35] DimethylSulfoxide.x3d - title billboard

  [36] DimethylSulfoxide.x3d - (default X3D view from 0 0 10)

Ethanol       [37] Ethanol.x3d - Inspect Ethanol

  [38] Ethanol.x3d - title billboard

  [39] Ethanol.x3d - (default X3D view from 0 0 10)

Glycerol Diacetate       [40] GlycerolDiacetate.x3d - Inspect GlycerolDiacetate

  [41] GlycerolDiacetate.x3d - title billboard

  [42] GlycerolDiacetate.x3d - (default X3D view from 0 0 10)

Histamine       [43] Histamine.x3d - Inspect Histamine

  [44] Histamine.x3d - title billboard

  [45] Histamine.x3d - (default X3D view from 0 0 10)

Oxytocin       [46] Oxytocin.x3d - Inspect Oxytocin

  [47] Oxytocin.x3d - title billboard

  [48] Oxytocin.x3d - (default X3D view from 0 0 10)

Pyruvic Acid       [49] PyruvicAcid.x3d - Inspect PyruvicAcid

  [50] PyruvicAcid.x3d - title billboard

  [51] PyruvicAcid.x3d - (default X3D view from 0 0 10)

Riboflavin       [52] Riboflavin.x3d - Inspect Riboflavin

  [53] Riboflavin.x3d - title billboard

  [54] Riboflavin.x3d - (default X3D view from 0 0 10)

Somato Statin       [55] SomatoStatin.x3d - Inspect SomatoStatin

  [56] SomatoStatin.x3d - title billboard

  [57] SomatoStatin.x3d - (default X3D view from 0 0 10)

Tartaric Acid       [58] TartaricAcid.x3d - Inspect TartaricAcid

  [59] TartaricAcid.x3d - title billboard

  [60] TartaricAcid.x3d - (default X3D view from 0 0 10)

Tetrahydrofuran       [61] Tetrahydrofuran.x3d - Inspect tetrahydrofuran

  [62] Tetrahydrofuran.x3d - title billboard

  [63] Tetrahydrofuran.x3d - (default X3D view from 0 0 10)

Trans DCE       [64] TransDCE.x3d - Inspect TransDCE

  [65] TransDCE.x3d - title billboard

  [66] TransDCE.x3d - (default X3D view from 0 0 10)

Vitamin K       [67] VitaminK.x3d - Inspect VitaminK

  [68] VitaminK.x3d - title billboard

  [69] VitaminK.x3d - (default X3D view from 0 0 10)

 

This viewpoint slideshow is online at
http://www.web3d.org/x3d/content/examples/Basic/ChemicalMarkupLanguage/viewpointSlideshow.html

Viewpoint image version history at
http://sourceforge.net/p/x3d/code/HEAD/tree/www.web3d.org/x3d/content/examples/Basic/ChemicalMarkupLanguage/_viewpoints

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